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Fogel DB (2003) “Evolutionary Entertainment with Intelligent Agents,” IEEE Computer, June, pp. 94-96. (.pdf)
Weekes D and Fogel GB (2003) “Evolutionary Optimization, Backpropagation, and Data Preparation Issues in QSAR Modeling of HIV Inhibition by HEPT Derivatives,” BioSystems, Vol. 72, pp. 149-158. (.pdf)
Fogel GB, Porto VW, Weekes DG, Fogel DB, Griffey RH, McNeil JA, Lesnik E, Ecker D, and Sampath R (2002) “Discovery of RNA Structural Elements Using Evolutionary Computation,” Nucleic Acids Research, Vol. 30:23, pp. 5310-5317. (.pdf)
Landavazo DG, Fogel GB, and Fogel DB (2002) “Quantitative Structure-Activity Relationships by Evolved Neural Networks for the Inhibition of Dihydrofolate Reductase by Pyrimidines,” BioSystems, Vol. 65:1, pp. 37-47. (.pdf)
Chellapilla K and Fogel DB (1999) "Evolving Neural Networks to Play Checkers without Expert Knowledge," IEEE Trans. Neural Networks, Vol. 10:6, pp. 1382-1391. (.pdf)
Fogel GB, Collins C, Li J, and Brunk CF (1999) "Prokaryotic Genome Size and SSU rRNA Copy Number: Estimation of Microbial Relative Abundance from a Mixed Population," Microbial Ecology, Vol. 38, pp. 93-113. (.pdf)
Fogel DB, Wasson EC, Boughton EM, and Porto VW (1998) "Evolving Artificial Neural Networks for Screening Features from Mammograms," Artificial Intelligence in Medicine, Vol. 14, pp. 317-326. (.pdf)
Porto VW, Fogel DB, and Fogel LJ (1998) "Generating Novel Tactics through Evolutionary Computation," SigArt Bulletin, ACM Press, Fall, pp. 8-14. (.pdf)
Fogel DB (1997) "The Advantages of Evolutionary Computation," Bio-Computing and Emergent Computation 1997, D. Lundh, B. Olsson, and A. Narayanan (eds.), Sköve, Sweden, World Scientific Press, Singapore, pp. 1-11. (.pdf)
Gehlhaar DK, Verkhivker GM, Rejto PA, Sherman CJ, Fogel DB, Fogel LJ, and Freer ST (1995) "Molecular Recognition of the Inhibitor AG-1343 by HIV-1 Protease: Conformationally Flexible Docking by Evolutionary Programming," Chemistry and Biology, Vol 2:5, 317-324. (.pdf)